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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913247.1_cds_XP_016463299.1_56437
CDS Infomation

[gene=LOC107786347] [db_xref=GeneID:107786347] [protein=protein CUP-SHAPED COTYLEDON 3-like] [protein_id=XP_016463299.1] [location=join(84561..85002,86066..86340,87291..88013)] [gbkey=CDS]
Sequence

ATGTGGGGTTTCATAGTCCCTTTCAATCCCATTAATACTCATCACCACCACCCCCTCCTC
TTAATTCTATCCAATCCTTGTTTTCTCCACTTGTTCCATACTTTCTTTACTCTTCTCTTA
CTTCCCTTTCTCACTTTGGTTTCAGTGCCTAATTTGTTTTCTTTTCTTTTCTCTTTTGTA
TATATAATCTTCCACTTCCTAACCAGGTACTACTATCACTTAATACCATCATTCATCATG
TTGTCAATGGAAGAAATATTGTGTGAACTAAGTAGAGAAGACATGAATAATGAGAAAGGT
CTACCACCTGGTTTTAGGTTTCATCCTACTGATGAAGAGCTTATCACTTTCTACCTTGCC
TCTAAGGTTTTTAACGGCACCTTTTGTGGTATTCAGATTGCTGAAGTTGATCTCAACAGA
TGTGAGCCCTGGGAACTTCCAGAAGTGGCAAAGATGGGGGAAAGAGAATGGTATTTCTTT
AGCTTAAGGGACAGAAAATACCCAACCGGACTAAGAACAAACCGGGCAACAGGAGCTGGT
TATTGGAAAGCTACAGGAAAAGATAGAGAAGTGTACAGTGCAACAAATGGAGCACTCCTT
GGGATGAAGAAAACATTGGTTTTTTACAAAGGAAGAGCACCAAAGGGTGAGAAAACCAAA
TGGGTTATGCATGAATATCGTCTTGACGGCGATTTTTCCTACCGTTACTCTTCTAAGGAG
GAATGGGTGATATGCAGAATACTACACAAAATAGGGGAGAAGAAAAATCCAATATACCAA
GCTGCAGGACAAAACTATGGCTACCCTACAAGCTTGAAAACATGGCCATCATCATCTTTT
CTTAACACAGCAACATCAGCAGAAGCAGCTCCAAATCCTATATTGGCTGAAACACCAAAT
CCAAAAACCACAACAACTACACATTGGCAAGAATCATTCCAAATATCACAAAACTCAATG
CAATCACTGCACAACTTTTATCTATTTCACCACCAAGAAAACGACCTTATGAAATCCCTC
TTCAACCCCATTAATGTTTCCCAAACAAACCTCTTCCCAATAAATAATAGTGTCCTTTCT
TCTGCTACCTCCTTTTCTACATCCCAAAGCACAAAAAAATACAAAGAAGACATAAACAAA
AACTCGTCACTATCATCTTTCCTCGTTAGCAATTCAAAGAAAAATGAAAAACATCAAGTC
CCACTCATGCAGGCTAACACAACAATGAAAACAGAAGCCAGTTTTTCACCATATTCTGGT
TGTTACAATGATCAAAACCCTATGGCTACGAATTTTGGTATGAATAATTCAACAGATTGG
AGTTTAGTAGGCATAGAAGGGATGCATTTTAATGGTGGATGTACTCAGTCTCAGATGGTG
TTGGATCACATGCATTGTCCCATCAAAATAGCTGCAGAATCTTGGCCTCTTGATCTCTAA

Peptide Sequence

PEP ID

XP_016463299.1
PEP Infomation

PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Nicotiana tabacum]
Sequence

MWGFIVPFNPINTHHHHPLLLILSNPCFLHLFHTFFTLLLLPFLTLVSVPNLFSFLFSFV
YIIFHFLTRYYYHLIPSFIMLSMEEILCELSREDMNNEKGLPPGFRFHPTDEELITFYLA
SKVFNGTFCGIQIAEVDLNRCEPWELPEVAKMGEREWYFFSLRDRKYPTGLRTNRATGAG
YWKATGKDREVYSATNGALLGMKKTLVFYKGRAPKGEKTKWVMHEYRLDGDFSYRYSSKE
EWVICRILHKIGEKKNPIYQAAGQNYGYPTSLKTWPSSSFLNTATSAEAAPNPILAETPN
PKTTTTTHWQESFQISQNSMQSLHNFYLFHHQENDLMKSLFNPINVSQTNLFPINNSVLS
SATSFSTSQSTKKYKEDINKNSSLSSFLVSNSKKNEKHQVPLMQANTTMKTEASFSPYSG
CYNDQNPMATNFGMNNSTDWSLVGIEGMHFNGGCTQSQMVLDHMHCPIKIAAESWPLDL

Transcript Sequence

Gene sequence data has not been registered.